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UniProtKB/Swiss-Prot entry Q9STS1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BADH2_ARATH
Primary accession number Q9STS1
Secondary accession number Q42237
Integrated into Swiss-Prot on October 31, 2006
Sequence was last modified on May 1, 2000 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 46)
Name and origin of the protein
Protein name Betaine aldehyde dehydrogenase 2, mitochondrial [Precursor]
Synonyms BADH
EC 1.2.1.8
Aldehyde dehydrogenase family 10 member A9
Gene name
Name: ALDH10A9
OrderedLocusNames: At3g48170
ORFNames: T24C20.50
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048706; PubMed=11130713 [NCBI, ExPASy, EBI, Israel, Japan]
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.;
"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
Nature 408:820-822(2000).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[3]
NUCLEOTIDE SEQUENCE [MRNA] OF 417-503.
STRAIN=cv. Columbia;
TISSUE=Seed;
Raynal M., Grellet F., Laudie M., Meyer Y., Cooke R., Delseny M.;
"The Arabidopsis thaliana transcribed genome: the GDR cDNA program.";
Submitted (FEB-1994) to the EMBL/GenBank/DDBJ databases.
[4]
NOMENCLATURE.
DOI=10.1016/j.tplants.2004.06.004; PubMed=15358267 [NCBI, ExPASy, EBI, Israel, Japan]
Kirch H.-H., Bartels D., Wei Y., Schnable P.S., Wood A.J.;
"The ALDH gene superfamily of Arabidopsis.";
Trends Plant Sci. 9:371-377(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AL096856; CAB51064.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF370333; AAK44148.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY062987; AAL34161.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z29888; CAA82832.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T13006; T13006.
RefSeq NP_190400.1; -.
UniGene At.1613
3D structure databases
HSSP P05091; 1O04. [HSSP ENTRY / PDB]
ModBase Q9STS1.
Organism-specific databases
TAIR At3g48170; -.
Gene expression databases
ArrayExpress Q9STS1; -.
GermOnline AT3G48170; Arabidopsis thaliana.
Ontologies
GO
GO:0005739; Cellular component: mitochondrion (inferred from electronic annotation from UniProtKB-KW).
GO:0005777; Cellular component: peroxisome (inferred from direct assay from TAIR).
GO:0008802; Molecular function: betaine-aldehyde dehydrogenase activity (inferred from electronic annotation from EC).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR016160; Ald_DHase_CS.
IPR016162; Ald_DHase_N.
IPR015590; Aldehyde_DHase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.605.10; Aldehyde_dehydrogenase_N; 1.
PANTHER PTHR11699; Aldehyde_dehyd; 1.
Pfam PF00171; Aldedh; 1.
Pfam graphical view of domain structure.
PROSITE PS00070; ALDEHYDE_DEHYDR_CYS; 1.
PS00687; ALDEHYDE_DEHYDR_GLU; 1.
BLOCKS Q9STS1.
ProtoNet Q9STS1.
Genome annotation databases
GeneID 823972; -.
GenomeReviews BA000014_GR; AT3G48170.
KEGG ath:AT3G48170; -.
NMPDR fig|3702.1.peg.16052; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Mitochondrion; NAD; Oxidoreductase; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1    65  65     Mitochondrion (Potential). 
CHAIN   66   503  438     Betaine aldehyde dehydrogenase 2, mitochondrial. PRO_0000256063
NP_BIND   238   243  6     NAD (By similarity). 
ACT_SITE   260   260        Proton acceptor (By similarity). 
ACT_SITE   294   294        Nucleophile (By similarity). 
SITE   162   162  1     Transition state stabilizer (By similarity). 
Sequence information
Length: 503 AA [This is the length of the unprocessed precursor] Molecular weight: 54918 Da [This is the MW of the unprocessed precursor] CRC64: 7E17AE86E9F2784C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAITVPRRQL FIGGQWTEPV LRKTLPVVNP ATEDIIGYIP AATSEDVELA VEAARKAFTR 

        70         80         90        100        110        120 
NNGKDWARAT GAVRAKYLRA IAAKVIERKS ELANLEAIDC GKPLDEAAWD MDDVAGCFEY 

       130        140        150        160        170        180 
YADLAEGLDA KQKTPLSLPM DTFKGYILKE PIGVVGMITP WNYPLLMAVW KVAPSLAAGC 

       190        200        210        220        230        240 
TAILKPSELA SLTCLELADI CREVGLPPGV LNILTGLGTE AGAPLASHPH VDKIVFTGST 

       250        260        270        280        290        300 
TTGSSIMTSA AKLVKPVSLE LGGKSPIIVF DDVDIDKAVE WTMFGCFWTN GQICSATSRL 

       310        320        330        340        350        360 
LVHERIADEF LDKLVKWTKN IKISDPFEEG CRLGPVVSKG QYERVLKFVS NARNEGATVL 

       370        380        390        400        410        420 
CGGVRPEHLK KGYFVEPAIV SNVTTSMEIW REEVFGPALC VKTFSTEDEA IQLANDSQYG 

       430        440        450        460        470        480 
LAGAVLSNDL ERCDRVSKAF QAGIVWVNCS QPCFCQAPWG GTKRSGFGRE LGEWGLENYL 

       490        500 
SVKQVTQYIS DEPWGWYKPP SKL 

Q9STS1 in FASTA format

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