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UniProtKB/Swiss-Prot entry Q9FE01


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name APX2_ORYSJ
Primary accession number Q9FE01
Secondary accession number Q40735
Integrated into Swiss-Prot on October 25, 2005
Sequence was last modified on March 1, 2001 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 43)
Name and origin of the protein
Protein name L-ascorbate peroxidase 2, cytosolic
Synonyms EC 1.11.1.11
APXb
OsAPx02
Gene name
Name: APX2
Synonyms: SS622
OrderedLocusNames: Os07g0694700, LOC_Os07g49400
ORFNames: P0627E10.14
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], ENZYME REGULATION, FUNCTION, AND BIOPHYSICOCHEMICAL PROPERTIES.
STRAIN=cv. Nipponbare;
DOI=10.1007/s10529-004-6587-0; PubMed=15685422 [NCBI, ExPASy, EBI, Israel, Japan]
Lu Z., Takano T., Liu S.;
"Purification and characterization of two ascorbate peroxidases of rice (Oryza sativa L.) expressed in Escherichia coli.";
Biotechnol. Lett. 27:63-67(2005).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Nipponbare;
Morita S., Kaminaka H., Masumura T., Tanaka K.;
"The expression of two cytosolic ascorbate peroxidase genes in rice.";
Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
The international rice genome sequencing project (IRGSP) consortium;
"Oryza sativa nipponbare chromosome 7 genomic DNA sequence.";
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
[4]
PROTEIN SEQUENCE OF 26-35.
STRAIN=cv. Nipponbare;
TISSUE=Anther, Panicle, and Stem;
DOI=10.1093/nar/gkh020; PubMed=14681440 [NCBI, ExPASy, EBI, Israel, Japan]
Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.;
"Rice proteome database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003.";
Nucleic Acids Res. 32:D388-D392(2004).
[5]
NUCLEOTIDE SEQUENCE [MRNA] OF 202-251.
TISSUE=Callus;
Uchimiya H.;
Submitted (NOV-1993) to the EMBL/GenBank/DDBJ databases.
[6]
TISSUE SPECIFICITY, AND INDUCTION.
DOI=10.1016/j.gene.2003.08.017; PubMed=14644501 [NCBI, ExPASy, EBI, Israel, Japan]
Agrawal G.K., Jwa N.-S., Iwahashi H., Rakwal R.;
"Importance of ascorbate peroxidases OsAPX1 and OsAPX2 in the rice pathogen response pathways and growth and reproduction revealed by their transcriptional profiling.";
Gene 322:93-103(2003).
[7]
NOMENCLATURE.
DOI=10.1007/s00239-004-2666-z; PubMed=15599508 [NCBI, ExPASy, EBI, Israel, Japan]
Teixeira F.K., Menezes-Benavente L., Margis R., Margis-Pinheiro M.;
"Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: inferences from the rice genome.";
J. Mol. Evol. 59:761-770(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB053297; BAB20889.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB050724; BAB17666.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP005199; BAC84063.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D25238; BAA04962.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T04114; T04114.
RefSeq NP_001060741.1; -.
UniGene Os.12693
3D structure databases
HSSP Q43758; 1OAF. [HSSP ENTRY / PDB]
SMR Q9FE01; 4-250.
ModBase Q9FE01.
Protein family/group databases
PeroxiBase 1866; OsAPx02.
2D gel databases
ANU-2DPAGE Q9FE01; -.
Organism-specific databases
Gramene Q9FE01; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0016688; Molecular function: L-ascorbate peroxidase activity (inferred from electronic annotation from EC).
GO:0030955; Molecular function: potassium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0042744; Biological process: hydrogen peroxide catabolic process (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR002207; Asc_perxdse.
IPR002016; Haem_peroxidase_pln/fun/bac.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00459; ASPEROXIDASE.
PR00458; PEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet Q9FE01.
Genome annotation databases
GeneID 4344397; -.
KEGG osa:4344397; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Cytoplasm; Direct protein sequencing; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Potassium; Stress response.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   251  251     L-ascorbate peroxidase 2, cytosolic. PRO_0000055594
ACT_SITE   43    43        Proton acceptor (By similarity). 
METAL   164   164        Iron (heme axial ligand) (By similarity). 
METAL   165   165        Potassium or calcium (By similarity). 
METAL   181   181        Potassium or calcium (By similarity). 
METAL   183   183        Potassium or calcium (By similarity). 
METAL   186   186        Potassium or calcium; via carbonyl oxygen (By similarity). 
METAL   188   188        Potassium or calcium (By similarity). 
SITE   39    39  1     Transition state stabilizer (By similarity). 
CONFLICT   202   215        GLLQLPSDKALMAD -> PSSSCQVTKPSWLT (in Ref. 5). 
Sequence information
Length: 251 AA [This is the length of the unprocessed precursor] Molecular weight: 27118 Da [This is the MW of the unprocessed precursor] CRC64: D6497B224285DF93 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGSKSYPTVS DEYLAAVGKA KRKLRGLIAE KNCAPLMLRL AWHSAGTFDV SSRTGGPFGT 

        70         80         90        100        110        120 
MKNPGEQSHA ANAGLDIAVR LLDPIKDQLP ILSYADFYQL AGVVAVEVTG GPEVPFHPGR 

       130        140        150        160        170        180 
QDKPEPPPEG RLPDATQGSD HLRQVFSAQM GLSDKDIVAL SGGHTLGRCH KERSGFEGAW 

       190        200        210        220        230        240 
TSNPLIFDNS YFTELVSGEK EGLLQLPSDK ALMADPAFRP LVEKYAADED AFFADYAEAH 

       250 
LKLSELGFAE E 

Q9FE01 in FASTA format

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