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UniProtKB/Swiss-Prot entry Q6NJX0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DEOC_CORDI
Primary accession number Q6NJX0
Secondary accession numbers None
Integrated into Swiss-Prot on April 4, 2006
Sequence was last modified on July 5, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 30)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase
Deoxyriboaldolase
DERA
Gene name
Name: deoC
OrderedLocusNames: DIP0273
From
Corynebacterium diphtheriae [TaxID: 1717] [HAMAP proteome]
Taxonomy Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 700971 / NCTC 13129 / Biotype gravis;
DOI=10.1093/nar/gkg874; PubMed=14602910 [NCBI, ExPASy, EBI, Israel, Japan]
Cerdeno-Tarraga A.-M., Efstratiou A., Dover L.G., Holden M.T.G., Pallen M.J., Bentley S.D., Besra G.S., Churcher C.M., James K.D., De Zoysa A., Chillingworth T., Cronin A., Dowd L., Feltwell T., Hamlin N., Holroyd S., Jagels K., Moule S., Quail M.A., Rabbinowitsch E., Rutherford K.M., Thomson N.R., Unwin L., Whitehead S., Barrell B.G., Parkhill J.;
"The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.";
Nucleic Acids Res. 31:6516-6523(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BX248354; CAE48777.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_938661.1; -.
3D structure databases
ModBase Q6NJX0.
Enzyme and pathway databases
BioCyc CDIP257309:DIP0273-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00114; -; 1.
PBIL [Tree]
InterPro IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
TIGRFAMs TIGR00126; deoC; 1.
BLOCKS Q6NJX0.
ProtoNet Q6NJX0.
Genome annotation databases
GeneID 2648850; -.
GenomeReviews BX248353_GR; DIP0273.
KEGG cdi:DIP0273; -.
NMPDR fig|257309.1.peg.252; -.
Phylogenomic databases
HOGENOM Q6NJX0; -.
Genome annotation databases
CMR Q6NJX0; DIP0273.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   218  218     Deoxyribose-phosphate aldolase. PRO_0000231537
ACT_SITE   152   152        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   182   182        By similarity. 
Sequence information
Length: 218 AA [This is the length of the unprocessed precursor] Molecular weight: 22352 Da [This is the MW of the unprocessed precursor] CRC64: A6BB20B99D4159AE [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTTRNDVAQM IDHTLLKPEA TTDDFKALIA DAVRLGTYSV CVSPSALPVE VPENLHVATV 

        70         80         90        100        110        120 
VGFPSGAVKP EIKAAEAART VADGAEEVDM VINIALAKEG KFDELEAEIK AVRDAVPAPG 

       130        140        150        160        170        180 
ILKVILETAA LTDDEIVAAC KASENAGADF VKTSTGFHPA GGASVHAVEI MHATVGGRLG 

       190        200        210 
IKASGGIRTA KDALAMIEAG ATRLGLSASA AILEELGE 

Q6NJX0 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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