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UniProtKB/Swiss-Prot entry Q65H59

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DEOC1_BACLD
Primary accession number Q65H59
Secondary accession number Q62SL6
Integrated into Swiss-Prot on April 4, 2006
Sequence was last modified on April 4, 2006 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 31)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase 1
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase 1
Deoxyriboaldolase 1
DERA 1
Gene name
Name: deoC1
OrderedLocusNames: BLi02734, BL02102
From
Bacillus licheniformis (strain DSM 13 / ATCC 14580) [TaxID: 279010] [HAMAP proteome]
Taxonomy Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1159/000079829; PubMed=15383718 [NCBI, ExPASy, EBI, Israel, Japan]
Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.;
"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential.";
J. Mol. Microbiol. Biotechnol. 7:204-211(2004).
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1186/gb-2004-5-10-r77; PubMed=15461803 [NCBI, ExPASy, EBI, Israel, Japan]
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A., Galleron N., Ehrlich S.D., Berka R.M.;
"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species.";
Genome Biol. 5:RESEARCH077.1-RESEARCH077.12(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE017333; AAU41605.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CP000002; AAU24243.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_079881.1; -.
YP_092298.1; -.
3D structure databases
ModBase Q65H59.
Enzyme and pathway databases
BioCyc BLIC279010:BL02102-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
GO:0009264; Biological process: deoxyribonucleotide catabolic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_00114; -; 1.
PBIL [Tree]
InterPro IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
TIGRFAMs TIGR00126; deoC; 1.
ProtoNet Q65H59.
Genome annotation databases
GeneID 3029062; -.
3097769; -.
GenomeReviews CP000002_GR; BL02102.
AE017333_GR; BLi02734.
KEGG bld:BLi02734; -.
bli:BL02102; -.
NMPDR fig|279010.5.peg.3005; -.
Phylogenomic databases
HOGENOM Q65H59; -.
Genome annotation databases
CMR Q65H59; BLi02734.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   223  223     Deoxyribose-phosphate aldolase 1. PRO_0000231531
ACT_SITE   154   154        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   183   183        By similarity. 
Sequence information
Length: 223 AA [This is the length of the unprocessed precursor] Molecular weight: 23373 Da [This is the MW of the unprocessed precursor] CRC64: 933EC6967EF3C135 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTKQIARMID HTALKPDTVK SEIEALCKEA RVYGFASVCV NPCWVKLCAE LLKESEVKVC 

        70         80         90        100        110        120 
TVIGFPLGAA SPETKAFETR QAIADGAGEV DMVINIGALK DRDTGTVEHD IRAVTDAADG 

       130        140        150        160        170        180 
KALVKVIIET SLLTDEEKRL ACELAVKAGA DFVKTSTGFS GGGATVRDIK LMREAVGPDI 

       190        200        210        220 
GVKASGGVRD KESALAMIEA GATRIGASAG VSIVKGLTAD EDY
Q65H59 in FASTA format

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