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UniProtKB/Swiss-Prot entry B1IS38

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DEOC_ECOLC
Primary accession number B1IS38
Secondary accession numbers None
Integrated into Swiss-Prot on May 20, 2008
Sequence was last modified on April 29, 2008 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 6)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase
Deoxyriboaldolase
DERA
Gene name
Name: deoC
OrderedLocusNames: EcolC_3675
From
Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) [TaxID: 481805] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Ingram L., Richardson P.;
"Complete sequence of Escherichia coli C str. ATCC 8739.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000946; ACA79286.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001726613.1; -.
3D structure databases
ModBase B1IS38.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00592; -; 1.
PBIL [Tree]
InterPro IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
BLOCKS B1IS38.
ProtoNet B1IS38.
Genome annotation databases
GeneID 6066195; -.
GenomeReviews CP000946_GR; EcolC_3675.
KEGG ecl:EcolC_3675; -.
CMR B1IS38; EcolC_3675.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Acetylation; Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   259  259     Deoxyribose-phosphate aldolase. PRO_1000082417
ACT_SITE   167   167        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   201   201        By similarity. 
MOD_RES   167   167        N6-acetyllysine (By similarity). 
Sequence information
Length: 259 AA [This is the length of the unprocessed precursor] Molecular weight: 27748 Da [This is the MW of the unprocessed precursor] CRC64: 3D7EA7C83DE4124F [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTDLKASSLR ALKLMDLTTL NDDDTDEKVI ALCHQAKTPV GNTAAICIYP RFIPIARKTL 

        70         80         90        100        110        120 
KEQGTPEIRI ATVTNFPHGN DDIEIALAET RAAIAYGADE VDVVFPYRAL MAGNEQVGFD 

       130        140        150        160        170        180 
LVKACKEACA AANVLLKVII ETGELKDEAL IRKASEISIK AGADFIKTST GKVAVNATPE 

       190        200        210        220        230        240 
SARIMMEVIR DMGVEKTVGF KPAGGVRTAE DAQKYLAIAD ELFGADWADA RHYRFGASSL 

       250 
LASLLKALGH GDGKSASSY
B1IS38 in FASTA format

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