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UniProtKB/Swiss-Prot entry A5EEN4

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PDXH_BRASB
Primary accession number A5EEN4
Secondary accession numbers None
Integrated into Swiss-Prot on February 5, 2008
Sequence was last modified on June 12, 2007 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 16)
Name and origin of the protein
Protein name Pyridoxine/pyridoxamine 5'-phosphate oxidase
Synonyms EC 1.4.3.5
PNP/PMP oxidase
PNPOx
Pyridoxal 5'-phosphate synthase
Gene name
Name: pdxH
OrderedLocusNames: BBta_2463
From
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [TaxID: 288000] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1139548; PubMed=17540897 [NCBI, ExPASy, EBI, Israel, Japan]
Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.-C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z., Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.-S., Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., Sadowsky M.;
"Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia.";
Science 316:1307-1312(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000494; ABQ34628.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001238534.1; -.
3D structure databases
ModBase A5EEN4.
Ontologies
GO
GO:0010181; Molecular function: FMN binding (inferred from electronic annotation from HAMAP).
GO:0004733; Molecular function: pyridoxamine-phosphate oxidase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0008615; Biological process: pyridoxine biosynthetic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_01629; -; 1.
PBIL [Tree]
InterPro IPR011576; PNPOx_rel_FMN_bd_core.
IPR000659; Pyridox_oxidase.
IPR012349; Split_barrel_FMN_bd.
Graphical view of domain structure.
Gene3D G3DSA:2.30.110.10; PNPOx_FMN_bd; 1.
PANTHER PTHR10851; Pyridox_oxidase; 1.
Pfam PF01243; Pyridox_oxidase; 1.
Pfam graphical view of domain structure.
ProDom PD006312; Pyridox_oxidase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR00558; pdxH; 1.
PROSITE PS01064; PYRIDOX_OXIDASE; 1.
ProtoNet A5EEN4.
Genome annotation databases
GeneID 5152098; -.
GenomeReviews CP000494_GR; BBta_2463.
KEGG bbt:BBta_2463; -.
CMR A5EEN4; BBta_2463.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Flavoprotein; FMN; Oxidoreductase; Pyridoxine biosynthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   216  216     Pyridoxine/pyridoxamine 5'-phosphate oxidase. PRO_1000069681
NP_BIND   78    79  2     FMN (By similarity). 
NP_BIND   142   143  2     FMN (By similarity). 
REGION   193   195  3     Substrate binding (By similarity). 
BINDING   63    63        FMN (By similarity). 
BINDING   66    66        FMN; via amide nitrogen (By similarity). 
BINDING   68    68        Substrate (By similarity). 
BINDING   85    85        FMN (By similarity). 
BINDING   125   125        Substrate (By similarity). 
BINDING   129   129        Substrate (By similarity). 
Sequence information
Length: 216 AA [This is the length of the unprocessed precursor] Molecular weight: 24520 Da [This is the MW of the unprocessed precursor] CRC64: E2367921CB0B40CC [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTDPTSIKHQ TTLTSGTSAD FTQASEPFAL FAEWFSEANK SELNDPNAMA LATVDDSGLP 

        70         80         90        100        110        120 
DVRMVLMKGY DEDGFVFYSH KASQKGQELA GNPKAALLFH WKSLRRQVRI RGLVTPVTDE 

       130        140        150        160        170        180 
EADAYFATRP KQAQLGAWAS KQSQPLESRF AFEQAIAKVA AQYIIGEVPR PPGWSGWRIT 

       190        200        210 
PVRMEFWHDR PFRLHDRIEF RRDAAGQPWT KVRMYP
A5EEN4 in FASTA format

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