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HAMAP proteomes: Plastids


Proteomes by kingdom: [Summary] Bacteria Archaea Plastids

[complete plastid genomes][plastid genes encoding proteins]

List of complete plastid genomes

The UniProt Knowledgebase currently contains 136 complete plastid proteomes that are covered by the HAMAP project
(e.g. chloroplast, cyanelle, apicoplast, non-photosynthetic plastid).

More information about a particular plastid genome can be retrieved by clicking on the EMBL genome accession number(s).
You can also retrieve all the protein(s) encoded by a particular complete plastid genome by clicking on the protein count.

UniProtKB/Swiss-Prot Release 56.1 of 02-Sep-2008
UniProtKB/TrEMBL Release 39.1 of 02-Sep-2008

Statistics
Species
Species code
EMBL genome
 Total number
of entries 		Number of UniProtKB/
Swiss-Prot entries 		Number of UniProtKB/
TrEMBL entries 		Status in UniProtKB/
Swiss-Prot
Acorus americanus (Sweetflag) ACOAM EU273602 78 11 67
   14%
Acorus calamus (Sweet flag) ACOCL AJ879453 78 48 30
   61%
Adiantum capillus-veneris (Fern) ADICA AY178864 84 84 0
Complete
Aethionema cordifolium (Lebanon stonecress) AETCO AP009366 77 33 44
   42%
Aethionema grandiflorum (Persian stone-cress) AETGR AP009367 77 34 43
   44%
Agrostis stolonifera (Creeping bentgrass) AGRST EF115543 78 61 17
   78%
Amborella trichopoda. AMBTC AJ506156 80 63 17
   78%
Aneura mirabilis (Parasitic liverwort) ANEMR EU043314 62 11 51
   17%
Angiopteris evecta (Mule's foot fern) ANGEV DQ821119 85 39 46
   45%
Anthoceros formosae (Hornwort) ANTFO AB086179 88 88 0
Complete
Arabidopsis thaliana (Mouse-ear cress) ARATH AP000423 79 79 0
Complete
Arabis hirsuta (Hairy rock-cress) ARAHI AP009369 78 33 45
   42%
Astasia longa (Euglenophycean alga) ASTLO AJ294725 45 45 0
Complete
Atropa belladonna (Belladonna) ATRBE AJ316582 81 67 14
   82%
Barbarea verna (Land cress) BARVE AP009370 79 33 46
   41%
Bigelowiella natans (Pedinomonas minutissima) BIGNA DQ851108 57 57 0
Complete
Buxus microphylla (Little leaf boxwood) BUXMI EF380351 79 31 48
   39%
Calycanthus floridus var. glaucus CALFG AJ428413 81 63 18
   77%
Capsella bursa-pastoris (Shepherd's purse) CAPBU AP009371 80 33 47
   41%
Carica papaya (Papaya) CARPA EU431223 78 13 65
   16%
Ceratophyllum demersum (Rigid hornwort) CERDE EF614270 79 30 49
   37%
Chaetosphaeridium globosum CHAGL AF494278 95 74 21
   77%
Chara vulgaris CHAVU DQ229107 104 70 34
   67%
Chlamydomonas reinhardtii CHLRE BK000554 75 75 0
Complete
Chloranthus spicatus (Chulantree) CHLSC EF380352 81 32 49
   39%
Chlorella vulgaris (Green alga) CHLVU AB001684 88 88 0
Complete
Chlorokybus atmophyticus (Soil alga) CHLAT DQ422812 113 43 70
   38%
Citrus sinensis (Sweet orange) CITSI DQ864733 79 59 20
   74%
Coffea arabica (Coffee) COFAR EF044213 80 63 17
   78%
Crucihimalaya wallichii (Rock-cress) CRUWA AP009372 81 34 47
   41%
Cryptomeria japonica (Japanese cedar) CRYJA AP009377 82 14 68
   17%
Cucumis sativus (Cucumber) CUCSA AJ970307, DQ119058, DQ865975, DQ865976 88 63 25
   71%
Cuscuta exaltata (Tall dodder) CUSEX EU189132 65 22 43
   33%
Cuscuta gronovii (Common dodder) CUSGR AM711639 59 29 30
   49%
Cuscuta obtusiflora (Peruvian dodder) CUSOB EU189133 59 17 42
   28%
Cuscuta reflexa (Southern Asian dodder) CUSRE AM711640 67 37 30
   55%
Cyanidioschyzon merolae (Red alga) CYAME AB002583 207 92 115
   44%
Cyanidium caldarium CYACA AF022186 197 159 38
   80%
Cyanophora paradoxa CYAPA U30821 145 145 0
Complete
Cycas taitungensis (Prince sago) CYCTA AP009339 109 33 76
   30%
Daucus carota (Carrot) DAUCA DQ898156 79 62 17
   78%
Dioscorea elephantipes (Elephant's foot) DIOEL EF380353 79 31 48
   39%
Draba nemorosa (Woodland whitlowgrass) DRANE AP009373 78 33 45
   42%
Drimys granadensis DRIGR DQ887676 80 62 18
   77%
Eimeria tenella EIMTE AY217738 28 5 23
   17%
Emiliania huxleyi EMIHU AY741371 119 76 43
   63%
Epifagus virginiana (Beechdrops) EPIVI M81884 21 21 0
Complete
Eucalyptus globulus sp. globulus (Tasmanian blue gum) EUCGG AY780259 78 60 18
   76%
Euglena gracilis EUGGR X70810 67 67 0
Complete
Fagopyrum esculentum subsp. ancestrale (Wild buckwheat) FAGEA EU254477 78 0 78
0%
Glycine max (Soybean) SOYBN DQ317523 78 78 0
Complete
Gossypium barbadense (Sea-island cotton) GOSBA AP009123 78 61 17
   78%
Gossypium hirsutum (Upland cotton) GOSHI DQ345959 78 61 17
   78%
Gracilaria tenuistipitata var. liui (Red alga) GRATL AY673996 203 118 85
   58%
Guillardia theta (Cryptomonas phi) GUITH AF041468 147 147 0
Complete
Guizotia abyssinica (Niger) GUIAB EU549769 79 7 72
   8%
Helianthus annus (Common sunflower) HELAN DQ383815 80 63 17
   78%
Helicosporidium sp. subsp. Simulium jonesii HELSJ DQ398104 26 26 0
Complete
Heterosigma akashiwo (strain CCMP452) HETA4 EU168191 143 0 143
0%
Heterosigma akashiwo (strain NIES-293) HETA2 EU168190 143 0 143
0%
Hordeum vulgare (Barley) HORVU EF115541 76 54 22
   71%
Huperzia lucidula (Shining clubmoss) HUPLU AY660566 86 64 22
   74%
Illicium oligandrum ILLOL EF380354 81 31 50
   38%
Ipomoea purpurea (Common morning glory) IPOPU EU118126 79 25 54
   31%
Jasminum nudiflorum (Winter jasmine) JASNU DQ673255 79 61 18
   77%
Lactuca sativa (Garden lettuce) LACSA AP007232, DQ383816 83 63 20
   75%
Lemna minor (Common duckweed) LEMMI DQ400350 78 17 61
   21%
Lepidium virginicum (Virginia pepperweed) LEPVR AP009374 80 33 47
   41%
Leptosira terrestris (Pleurastrum terrestre) LEPTE EF506945 88 25 63
   28%
Liriodendron tulipifera (Tuliptree) LIRTU DQ899947 80 63 17
   78%
Lobularia maritima (Sweet alyssum) LOBMA AP009375 79 33 46
   41%
Lolium perenne (Perennial ryegrass) LOLPR AM777385 77 23 54
   29%
Lotus japonicus LOTJA AP002983 77 77 0
Complete
Manihot esculenta (Cassava) (Manioc) MANES EU117376 78 12 66
   15%
Marchantia polymorpha (Liverwort) MARPO X04465 92 90 2
   97%
Mesostigma viride MESVI AF166114 105 105 0
Complete
Morus indica (Milberry) MORIN DQ226511 78 61 17
   78%
Nandina domestica (Heavenly bamboo) NANDO DQ923117 80 37 43
   46%
Nasturtium officinale (Water-cress) NASOF AP009376 79 33 46
   41%
Nephroselmis olivacea NEPOL AF137379 124 85 39
   68%
Nicotiana sylvestris (Wood tobacco) NICSY AB237912 94 63 31
   67%
Nicotiana tabacum (Common tobacco) TOBAC Z00044 95 80 15
   84%
Nicotiana tomentosiformis (Tobacco) NICTO AB240139 93 63 30
   67%
Nuphar advena (Common spatterdock) NUPAD DQ354691 79 14 65
   17%
Nymphaea alba (White water-lily) NYMAL AJ627251 81 63 18