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HAMAP: Xanthomonas axonopodis pv. citri (Citrus canker) complete proteome

General information

Species:  Xanthomonas axonopodis pv. citri (Citrus canker)
Species code: XANAC
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas (TaxID: 92829) [NEWT/ NCBI]
Description: Xanthomonas axonopodis pv. citri causes citrus canker, which affects most commercial citrus cultivars, resulting in significant losses worldwide. Symptoms include canker lesions, leading to abscission of fruit and leaves and general tree decline.
Properties: Presence of flagella: Yes
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of XANAC entries in the UniProt Knowledgebase: 4354 (523 in UniProtKB/Swiss-Prot + 3831 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    306
Genome structure:
• Chromosome EMBL accession number AE008923 (circular; 5,175,554 bp) (download entry) (download Genome Reviews).
• Plasmid pXAC33 EMBL accession number AE008924 (circular; 33,700 bp) (download entry) (download Genome Reviews).
• Plasmid pXAC64 EMBL accession number AE008925 (circular; 64,920 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22022145; PubMed=12024217; [ NCBI , EBI , Israel , Japan ]
da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P., Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. ;
"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.";
Nature 417:459-463(2002).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Xanthomonas&GLspecies=axonopodis&GLstrain=citri306
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid190486%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Xaxo_306
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Xanthomonas_axonopodis.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p297_Xan_axono
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntxa01
 EBI Proteome Analysis page



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