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HAMAP: Pseudomonas aeruginosa complete proteome

General information

Species:  Pseudomonas aeruginosa
Species code: PSEAE
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas (TaxID: 287) [NEWT/ NCBI]
Description: Gram-negative rod-shaped bacterium that grows in soil, marshes and coastal marine habitats, as well on plants and animal tissues. It forms biofilms on wet surfaces such as those of rocks and soil. The emergence of P.aeruginosa as a major opportunistic human pathogen during the past century may be a consequence of its resistance to the antibiotics and disinfectants that eliminate other environmental bacteria. P.aeruginosa is now a significant source of bacteremia in burn victims, urinary-tract infections and hospital-acquired pneumonia in patients. It is also the predominant cause of morbidity and mortality in cystic fibrosis patients. Almost all strains are motile by means of a single polar flagellum, and some strains have two or three flagella. P.aeruginosa is a nonfermentative aerobe that derives its energy from oxidation rather than fermentation of carbohydrates. Although able to use more than 75 different organic compounds, it can grow on media supplying only acetate for carbon and ammonium sulfate for nitrogen. Most strains of P aeruginosa produce one or more pigments, the most common being pyocyanin (a phenazine pigment).
Properties: Presence of flagella: Yes
Interaction: Animal pathogen in Mammalia
Number of membranes: 2
Number of inteins:0
Statistics: Number of PSEAE entries in the UniProt Knowledgebase: 5559 (1172 in UniProtKB/Swiss-Prot + 4387 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228
Genome structure
Chromosome EMBL accession number AE004091 (circular; 6,264,404 bp) (download entry) (download Genome Reviews).
References
[1] MEDLINE=20437337; PubMed=10984043; [ NCBI , EBI , Israel , Japan ]
Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P., Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., Lagrou M., Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y., Brody L.L., Coulter S.N., Folger K.R., Kas A., Larbig K., Lim R.M., Smith K.A., Spencer D.H., Wong G.K.-S., Wu Z., Paulsen I.T., Reizer J., Saier M.H. Jr., Hancock R.E.W., Lory S., Olson M.V. ;
"Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.";
Nature 406:959-964(2000).
Web links
Official genome site(s):
http://www.pseudomonas.com/
Other web sites:
AeruList: http://bioinfo.hku.hk/GenoList/index.pl?database=aerulist
Alginate: http://www.fiu.edu/~matheek/Alginate_Genes.htm
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Pseudomonas&GLspecies=aeruginosa&GLstrain=PAO1
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid208964%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Paer_PA01
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Pseudomonas_aeruginosa.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p331_Pse_aerug
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntpa03
 EBI Proteome Analysis page



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