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HAMAP: Haloarcula marismortui (Halobacterium marismortui) complete proteome

General information

Species:  Haloarcula marismortui (Halobacterium marismortui)
Species code: HALMA
Taxonomy: Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula (TaxID: 2238) [NEWT/ NCBI]
Description: Haloarcula marismortui is a halophilic Archaeon isolated from the Dead Sea.
Properties: Presence of flagella: not known
Interaction: No
Number of membranes: 1
Number of inteins: 2 in 2 different sequences
Statistics: Number of HALMA entries in the UniProt Knowledgebase: 4234 (312 in UniProtKB/Swiss-Prot + 3922 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 43049 / DSM 3752 / JCM 8966
Genome structure:
• Chromosome I EMBL accession number AY596297 (circular; 3,131,724 bp) (download entry) (download Genome Reviews).
• Chromosome II EMBL accession number AY596298 (circular; 288,050 bp) (download entry) (download Genome Reviews).
• Plasmid pNG100 EMBL accession number AY596290 (circular; 33,303 bp) (download entry) (download Genome Reviews).
• Plasmid pNG200 EMBL accession number AY596291 (circular; 33,452 bp) (download entry) (download Genome Reviews).
• Plasmid pNG300 EMBL accession number AY596292 (circular; 39,521 bp) (download entry) (download Genome Reviews).
• Plasmid pNG400 EMBL accession number AY596293 (circular; 50,060 bp) (download entry) (download Genome Reviews).
• Plasmid pNG500 EMBL accession number AY596294 (circular; 132,678 bp) (download entry) (download Genome Reviews).
• Plasmid pNG600 EMBL accession number AY596295 (circular; 155,300 bp) (download entry) (download Genome Reviews).
• Plasmid pNG700 EMBL accession number AY596296 (circular; 410,554 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15520287; [ NCBI , EBI , Israel , Japan ]
Baliga N.S., Bonneau R., Facciotti M.T., Pan M., Glusman G., Deutsch E.W., Shannon P., Chiu Y., Weng R.S., Gan R.R., Hung P., Date S.V., Marcotte E., Hood L., Ng W.V. ;
"Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea.";
Genome Res. 14:2221-2234(2004).
Web links:
Official genome site(s):
http://baliga.systemsbiology.net//haloarcula/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Archaea&GLgenus=Haloarcula&GLspecies=marismortui&GLstrain=ATCC43049
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid272569%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Hmar_ATCC43049
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p105_Hal_maris
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=nthm01
 EBI Proteome Analysis page



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