Search for
You are here: ExPASy BR  > Databases  > Around UniProtKB  > HAMAP

Home Proteomes Families Documents Downloads Links
HAMAP: Gluconobacter oxydans (Gluconobacter suboxydans) complete proteome

General information

Species:  Gluconobacter oxydans (Gluconobacter suboxydans)
Species code: GLUOX
Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter (TaxID: 442) [NEWT/ NCBI]
Description: Gluconobacter oxydans is a Gram-negative, rod-shaped and obligately aerobic bacterium. It is able to incompletely oxidize a wide range of carbohydrates and alcohols thanks to the oxidative fermentation. It can grow in highly concentrated sugar solutions and at low pH values. G.oxydans is used for the synthesis of Vitamin C, D-gluconic acid and ketogluconic acids. It dwells in flowers and fruits. It can also be found in alcoholic beverages such as wines and beers as well as soft drinks where it causes off-flavors and spoilage.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of GLUOX entries in the UniProt Knowledgebase: 2626 (320 in UniProtKB/Swiss-Prot + 2306 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    621H
Genome structure:
• Chromosome EMBL accession number CP000009 (circular; 2,702,173 bp) (download entry) (download Genome Reviews).
• Plasmid pGOX1 EMBL accession number CP000004 (circular; 163,186 bp) (download entry) (download Genome Reviews).
• Plasmid pGOX2 EMBL accession number CP000005 (circular; 26,568 bp) (download entry) (download Genome Reviews).
• Plasmid pGOX3 EMBL accession number CP000006 (circular; 14,547 bp) (download entry) (download Genome Reviews).
• Plasmid pGOX4 EMBL accession number CP000007 (circular; 13,223 bp) (download entry) (download Genome Reviews).
• Plasmid pGOX5 EMBL accession number CP000008 (circular; 2,687 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15665824; [ NCBI , EBI , Israel , Japan ]
Prust C., Hoffmeister M., Liesegang H., Wiezer A., Fricke W.F., Ehrenreich A., Gottschalk G., Deppenmeier U. ;
"Complete genome sequence of the acetic acid bacterium Gluconobacter oxydans.";
Nat. Biotechnol. 23:195-200(2005).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Gluconobacter&GLspecies=oxydans&GLstrain=621H
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid290633%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Goxy_621H
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Gluconobacter_oxydans.htm
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p13325_Glu_oxyda
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntgo01
 EBI Proteome Analysis page



Tools