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HAMAP: Gloeobacter violaceus complete proteome

General information

Species:  Gloeobacter violaceus
Species code: GLOVI
Taxonomy: Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter (TaxID: 33072) [NEWT/ NCBI]
Description: Gloeobacter violaceus PCC 7421 is a rod-shaped cyanobacterium isolated from calcareous rock in Switzerland. It is an obligate photoautotroph, sensitive to strong light and it has a relatively long generation time.
Properties: Presence of flagella: No
Interaction: No
Number of membranes: 2
Number of inteins: 2 in 2 different sequences
Statistics: Number of GLOVI entries in the UniProt Knowledgebase: 4406 (398 in UniProtKB/Swiss-Prot + 4008 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    PCC 7421
Genome structure
Chromosome EMBL accession number BA000045 (circular; 4,659,019 bp) (download entry) (download Genome Reviews).
References
[1] MEDLINE=22977040; PubMed=14621292; [ NCBI , EBI , Israel , Japan ]
Nakamura Y., Kaneko T., Sato S., Mimuro M., Miyashita H., Tsuchiya T., Sasamoto S., Watanabe A., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Takeuchi C., Yamada M., Tabata S. ;
"Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids.";
DNA Res. 10:137-145(2003).
Web links
Official genome site(s):
http://bacteria.kazusa.or.jp/cyanobase/Gloeobacter/index.html
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Gloeobacter&GLspecies=violaceus&GLstrain=PCC7421
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid251221%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Gvio_PCC7421
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Gloeobacter_violaceus.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p9606_Glo_viola
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntgv01
 EBI Proteome Analysis page



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