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HAMAP: Bacillus anthracis complete proteome

General information

Species:  Bacillus anthracis
Species code: BACAN
Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group (TaxID: 1392) [NEWT/ NCBI]
Description: Bacillus anthracis is an endospore-forming bacterium that causes inhalational anthrax. During the course of the disease, endospores are taken up by alveolar macrophages where they germinate in phagolysosomal compartment. Vegetative cells then escape from the macrophage, eventually infecting blood.
Properties: Presence of flagella: Yes
Interaction: Animal pathogen in Mammalia
Number of membranes: 1
Number of inteins:0
Statistics: Number of BACAN entries in the UniProt Knowledgebase: 5589 (662 in UniProtKB/Swiss-Prot + 4927 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    Ames ancestor
Genome structure
• Chromosome EMBL accession number AE017334 (circular; 5,227,419 bp) (download entry) (download Genome Reviews).
• Plasmid pXO1 EMBL accession number AE017336 (circular; 181,677 bp) (download entry) (download Genome Reviews).
• Plasmid pXO2 EMBL accession number AE017335 (circular; 94,830 bp) (download entry) (download Genome Reviews).
References
[1] Ravel J., Rasko D.A., Shumway M.F., Jiang L., Cer R.Z., Federova N.B., Wilson M., Stanley S., Decker S., Read T.D., Salzberg S.L., Fraser C.M. ;
"Bacillus anthracis comparative genomics.";
Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases.
Web links
AnthraCyc: http://biocyc.org/ANTHRA/organism-summary?object=ANTHRA
AnthraList: http://bioinfo.hku.hk/GenoList/index.pl?database=anthralist
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Bacillus&GLspecies=anthracis&GLstrain=Ames
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=10878
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bant_AMES
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p10878_Bac_anthr
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntba05
EBI Proteome Analysis page
Karyn's Genomes

Strain:    Ames / isolate Porton
Genome structure
Chromosome EMBL accession number AE016879 (circular; 5,227,293 bp) (download entry) (download Genome Reviews).
References
[1] MEDLINE=22608414; PubMed=12721629; [ NCBI , EBI , Israel , Japan ]
Read T.D., Peterson S.N., Tourasse N.J., Baillie L.W., Paulsen I.T., Nelson K.E., Tettelin H., Fouts D.E., Eisen J.A., Gill S.R., Holtzapple E.K., Okstad O.A., Helgason E., Rilstone J., Wu M., Kolonay J.F., Beanan M.J., Dodson R.J., Brinkac L.M., Gwinn M.L., DeBoy R.T., Madpu R., Daugherty S.C., Durkin A.S., Haft D.H., Nelson W.C., Peterson J.D., Pop M., Khouri H.M., Radune D., Benton J.L., Mahamoud Y., Jiang L., Hance I.R., Weidman J.F., Berry K.J., Plaut R.D., Wolf A.M., Watkins K.L., Nierman W.C., Hazen A., Cline R.T., Redmond C., Thwaite J.E., White O., Salzberg S.L., Thomason B., Friedlander A.M., Koehler T.M., Hanna P.C., Kolstoe A.-B., Fraser C.M. ;
"The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.";
Nature 423:81-86(2003).
Web links
AnthraCyc: http://biocyc.org/ANTHRA/organism-summary?object=ANTHRA
AnthraList: http://bioinfo.hku.hk/GenoList/index.pl?database=anthralist
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Bacillus&GLspecies=anthracis&GLstrain=Ames
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=10878
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bant_AMES
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p10878_Bac_anthr
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntba05
EBI Proteome Analysis page
Karyn's Genomes

Strain:    Sterne
Genome structure
Chromosome EMBL accession number AE017225 (circular; 5,228,663 bp) (download entry) (download Genome Reviews).
References
[1] Brettin T.S., Bruce D., Challacombe J.F., Gilna P., Han C., Hill K., Hitchcock P., Jackson P., Keim P., Longmire J., Lucas S., Okinaka R., Richardson P., Rubin E., Tice H. ;
"Complete genome sequence of Bacillus anthracis Sterne.";
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
Web links
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/bacan/bacan.info.html
Other web sites:
AnthraCyc: http://biocyc.org/ANTHRA/organism-summary?object=ANTHRA
AnthraList: http://bioinfo.hku.hk/GenoList/index.pl?database=anthralist
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Bacillus&GLspecies=anthracis&GLstrain=Ames
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=10878
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bant_AMES
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p10878_Bac_anthr
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntba05
EBI Proteome Analysis page
Karyn's Genomes



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