ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot ENZYME
Search for

NiceZyme View of ENZYME: EC 3.5.1.88

Official Name
Peptide deformylase.
Alternative Name(s)
PDF.
Polypeptide deformylase.
Reaction catalysed
Formyl-L-methionyl peptide + H(2)O <=> formate + methionyl peptide
Cofactor(s)
Fe(2+).
Comment(s)
  • Requires at least a dipeptide for an efficient rate of reaction.
  • N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
  • Differs in substrate specificity from EC 3.5.1.27 and EC 3.5.1.31.
Cross-references
BRENDA3.5.1.88
PUMA23.5.1.88
PRIAM enzyme-specific profiles3.5.1.88
KEGG Ligand Database for Enzyme Nomenclature3.5.1.88
IUBMB Enzyme Nomenclature3.5.1.88
IntEnz3.5.1.88
MEDLINEFind literature relating to 3.5.1.88
MetaCyc3.5.1.88
UniProtKB/Swiss-Prot
Q8YSK6, DEF1_ANASP;  Q81WH1, DEF1_BACAN;  Q819U0, DEF1_BACCR;  
P94462, DEF1_BACSU;  Q8G534, DEF1_BIFLO;  Q7WQS9, DEF1_BORBR;  
Q7W1V3, DEF1_BORPA;  Q7W0Q0, DEF1_BORPE;  O05100, DEF1_CLOAB;  
Q8XJL2, DEF1_CLOPE;  Q8FT51, DEF1_COREF;  Q8NQ46, DEF1_CORGL;  
Q83CV9, DEF1_COXBU;  Q7NJV3, DEF1_GLOVI;  Q82TW4, DEF1_NITEU;  
Q7V8G6, DEF1_PROMM;  Q88RR1, DEF1_PSEPK;  Q88B43, DEF1_PSESM;  
Q8Y3B0, DEF1_RALSO;  Q92IZ1, DEF1_RICCN;  Q8EKQ8, DEF1_SHEON;  
Q82IV0, DEF1_STRAW;  Q9RD27, DEF1_STRCO;  Q9KVU3, DEF1_VIBCH;  
Q87KD5, DEF1_VIBPA;  Q8DDE3, DEF1_VIBVU;  Q7MCQ2, DEF1_VIBVY;  
Q8PGV2, DEF1_XANAC;  Q8PCN7, DEF1_XANCP;  Q8YVH1, DEF2_ANASP;  
Q81MQ9, DEF2_BACAN;  Q819K2, DEF2_BACCR;  O31410, DEF2_BACST;  
Q45495, DEF2_BACSU;  Q8G487, DEF2_BIFLO;  Q7WG25, DEF2_BORBR;  
Q7W4K0, DEF2_BORPA;  Q7VS88, DEF2_BORPE;  Q97G95, DEF2_CLOAB;  
Q8XJX0, DEF2_CLOPE;  Q8FMD0, DEF2_COREF;  Q8NM41, DEF2_CORGL;  
Q83AK6, DEF2_COXBU;  Q7NIF5, DEF2_GLOVI;  Q82TC8, DEF2_NITEU;  
Q7V5F9, DEF2_PROMM;  Q88EA7, DEF2_PSEPK;  Q886I1, DEF2_PSESM;  
Q8XZJ6, DEF2_RALSO;  Q92JI7, DEF2_RICCN;  Q8EHZ2, DEF2_SHEON;  
Q826Q0, DEF2_STRAW;  Q9FCA2, DEF2_STRCO;  Q9KN16, DEF2_VIBCH;  
Q87I22, DEF2_VIBPA;  Q8D5P5, DEF2_VIBVU;  Q7MGK6, DEF2_VIBVY;  
Q8PG20, DEF2_XANAC;  Q8P4F9, DEF2_XANCP;  Q8EE60, DEF3_SHEON;  
Q825U9, DEF3_STRAW;  Q9XAQ2, DEF3_STRCO;  Q9K4A0, DEF4_STRCO;  
Q9FUZ2, DEFC_ARATH;  Q9FV54, DEFC_SOLLC;  Q9FV53, DEFM_ARATH;  
Q9HBH1, DEFM_HUMAN;  Q9FUZ0, DEFM_SOLLC;  A0LUE1, DEF_ACIC1;  
A4ST57, DEF_AERS4;  Q8UID1, DEF_AGRT5;  Q0VTE1, DEF_ALCBS;  
Q0A5B9, DEF_ALHEH;  A6TRW8, DEF_ALKMQ;  O66847, DEF_AQUAE;  
Q5LEQ9, DEF_BACFN;  Q64VP5, DEF_BACFR;  Q9K9I9, DEF_BACHD;  
Q5WFA2, DEF_BACSK;  Q8AAP4, DEF_BACTN;  A6L7J9, DEF_BACV8;  
A1UUB4, DEF_BARBK;  Q6G5F0, DEF_BARHE;  Q6G1G6, DEF_BARQU;  
A9ILK4, DEF_BART1;  Q1LT56, DEF_BAUCH;  A1A2Z1, DEF_BIFAA;  
Q7VQC0, DEF_BLOFL;  Q493I1, DEF_BLOPB;  O51092, DEF_BORBU;  
Q89BN9, DEF_BRAJA;  A5ESQ7, DEF_BRASB;  A4YLB9, DEF_BRASO;  
P63913, DEF_BRUME;  P63914, DEF_BRUSU;  P57563, DEF_BUCAI;  
Q8K975, DEF_BUCAP;  P59493, DEF_BUCBP;  Q057D2, DEF_BUCCC;  
Q9PIT8, DEF_CAMJE;  Q3AC18, DEF_CARHZ;  Q9ABF5, DEF_CAUCR;  
B0T1S9, DEF_CAUSK;  Q5L6G8, DEF_CHLAB;  Q823U4, DEF_CHLCV;  
Q253S4, DEF_CHLFF;  Q9PK41, DEF_CHLMU;  A1BHK0, DEF_CHLPD;  
Q9Z6J2, DEF_CHLPN;  Q3KM05, DEF_CHLTA;  Q8KCG7, DEF_CHLTE;  
O84357, DEF_CHLTR;  Q1QTJ5, DEF_CHRSD;  Q7NQ75, DEF_CHRVO;  
A8AQI1, DEF_CITK8;  O08450, DEF_CLOB8;  A9KM99, DEF_CLOPH;  
Q895Q2, DEF_CLOTE;  A3DCX4, DEF_CLOTH;  Q11X86, DEF_CYTH3;  
Q3Z8F6, DEF_DEHE1;  A5FRA7, DEF_DEHSB;  Q3ZXA9, DEF_DEHSC;  
Q9RRQ4, DEF_DEIRA;  Q24U09, DEF_DESHY;  Q6AQ98, DEF_DESPS;  
A5EWL8, DEF_DICNV;  P0A6K5, DEF_ECO57;  A8A591, DEF_ECOHS;  
A1AGH8, DEF_ECOK1;  Q0TCH5, DEF_ECOL5;  P0A6K4, DEF_ECOL6;  
B1IQ13, DEF_ECOLC;  P0A6K3, DEF_ECOLI;  Q1R646, DEF_ECOUT;  
A4WF95, DEF_ENT38;  Q82ZJ0, DEF_ENTFA;  A7MPE9, DEF_ENTS8;  
Q6D002, DEF_ERWCT;  Q2NCT3, DEF_ERYLH;  A5FGV5, DEF_FLAJ1;  
A6H0E7, DEF_FLAPJ;  P94601, DEF_FREDI;  Q8REF0, DEF_FUSNN;  
A0M3P3, DEF_GRAFK;  Q7VKK9, DEF_HAEDU;  Q4QMV6, DEF_HAEI8;  
A5UEB4, DEF_HAEIE;  A5UH92, DEF_HAEIG;  P44786, DEF_HAEIN;  
Q0I181, DEF_HAES1;  B0UWZ5, DEF_HAES2;  Q2SQX1, DEF_HAHCH;  
Q17XD4, DEF_HELAH;  Q7VIN5, DEF_HELHP;  Q1CT77, DEF_HELPH;  
Q9ZL51, DEF_HELPJ;  P56419, DEF_HELPY;  Q0C4V1, DEF_HYPNA;  
Q5QXI5, DEF_IDILO;  A6TEU0, DEF_KLEP7;  Q03QL3, DEF_LACBA;  
Q039N7, DEF_LACC3;  Q1GAR4, DEF_LACDA;  Q04B51, DEF_LACDB;  
Q042S1, DEF_LACGA;  A8YUR0, DEF_LACH4;  Q74JW2, DEF_LACJO;  
Q48661, DEF_LACLA;  Q88VB2, DEF_LACPL;  A5VJ71, DEF_LACRF;  
Q1WU76, DEF_LACS1;  Q38WP3, DEF_LACSS;  Q04RW4, DEF_LEPBJ;  
Q051Q7, DEF_LEPBL;  Q72S74, DEF_LEPIC;  Q93LE9, DEF_LEPIN;  
Q92CX8, DEF_LISIN;  Q721B5, DEF_LISMF;  Q8Y866, DEF_LISMO;  
A0AHG3, DEF_LISW6;  Q65QF2, DEF_MANSM;  Q0ASK2, DEF_MARMM;  
Q11LC7, DEF_MESSB;  Q2RK25, DEF_MOOTA;  Q7U206, DEF_MYCBO;  
A1KFQ1, DEF_MYCBP;  Q7NAK8, DEF_MYCGA;  P47352, DEF_MYCGE;  
A4T2T4, DEF_MYCGI;  Q9CBI2, DEF_MYCLE;  Q73T03, DEF_MYCPA;  
Q8EVJ8, DEF_MYCPE;  P75527, DEF_MYCPN;  Q98PN3, DEF_MYCPU;  
A0QQP8, DEF_MYCS2;  A3PTZ4, DEF_MYCSJ;  A1UAD9, DEF_MYCSK;  
Q1BEJ4, DEF_MYCSS;  A5TZF5, DEF_MYCTA;  P96275, DEF_MYCTU;  
A0PNK2, DEF_MYCUA;  A1T320, DEF_MYCVP;  Q5F5P6, DEF_NEIG1;  
A9M464, DEF_NEIM0;  P63915, DEF_NEIMA;  P63916, DEF_NEIMB;  
A1KRE5, DEF_NEIMF;  Q2GE16, DEF_NEOSM;  Q1QH78, DEF_NITHX;  
Q3J6U0, DEF_NITOC;  Q2G491, DEF_NOVAD;  Q8ER96, DEF_OCEIH;  
A5CF65, DEF_ORITB;  A6L9R8, DEF_PARD8;  P57948, DEF_PASMU;  
Q03F09, DEF_PEDPA;  Q3B2U9, DEF_PELLD;  A5D1C0, DEF_PELTS;  
Q4FNG1, DEF_PELUB;  Q7MYI2, DEF_PHOLL;  Q7MT07, DEF_PORGI;  
A2BZN6, DEF_PROM1;  A2BU25, DEF_PROM5;  Q31DB4, DEF_PROM9;  
Q7VED2, DEF_PROMA;  Q7V3K7, DEF_PROMP;  A2BNK7, DEF_PROMS;  
Q46HV9, DEF_PROMT;  A4SFP2, DEF_PROVI;  Q9I7A8, DEF_PSEAE;  
Q3IDI2, DEF_PSEHT;  A4XNB3, DEF_PSEMY;  A4VFH8, DEF_PSEU5;  
Q4FVQ4, DEF_PSYA2;  Q1QET1, DEF_PSYCK;  A5WBG1, DEF_PSYWF;  
Q98D52, DEF_RHILO;  Q92SH6, DEF_RHIME;  Q7UHZ5, DEF_RHOBA;  
Q2J2C6, DEF_RHOP2;  Q07TX0, DEF_RHOP5;  Q6NC51, DEF_RHOPA;  
Q21B62, DEF_RHOPB;  Q13F18, DEF_RHOPS;  A8GMJ8, DEF_RICAH;  
A8EXV2, DEF_RICCK;  Q9ZDV8, DEF_RICPR;  Q68XG1, DEF_RICTY;  
Q21PV5, DEF_SACD2;  A9MN80, DEF_SALAR;  Q57J64, DEF_SALCH;  
Q5PIT8, DEF_SALPA;  A9N8B1, DEF_SALPB;  Q2S316, DEF_SALRD;  
Q8Z1W9, DEF_SALTI;  Q8ZLM7, DEF_SALTY;  A8GKG5, DEF_SERP5;  
Q31VZ0, DEF_SHIBS;  Q32B63, DEF_SHIDS;  Q0T016, DEF_SHIF8;  
Q83PZ1, DEF_SHIFL;  Q3YWX3, DEF_SHISS;  Q2NQQ4, DEF_SODGM;  
A5VDM3, DEF_SPHWW;  Q5HGZ3, DEF_STAAC;  P68825, DEF_STAAM;  
P99077, DEF_STAAN;  Q6GHZ4, DEF_STAAR;  Q6GAC3, DEF_STAAS;  
P68826, DEF_STAAU;  Q8NX78, DEF_STAAW;  Q5HQ78, DEF_STAEQ;  
Q8CPN4, DEF_STAES;  Q3JZ45, DEF_STRA1;  Q8E378, DEF_STRA3;  
Q8DXF6, DEF_STRA5;  A8AV30, DEF_STRGC;  Q8DWC2, DEF_STRMU;  
P68771, DEF_STRP1;  Q04JP7, DEF_STRP2;  P68772, DEF_STRP3;  
Q5X9V1, DEF_STRP6;  Q8NZB7, DEF_STRP8;  Q1J9R7, DEF_STRPB;  
Q1JJW6, DEF_STRPC;  Q1JEV7, DEF_STRPD;  Q1J4M3, DEF_STRPF;  
A2RGI0, DEF_STRPG;  Q48R93, DEF_STRPM;  Q9F2F0, DEF_STRPN;  
Q8DP79, DEF_STRR6;  A4W418, DEF_STRS2;  A4VXS1, DEF_STRSY;  
Q5M1R9, DEF_STRT1;  Q5M6B0, DEF_STRT2;  Q03MP6, DEF_STRTD;  
A8Z5V9, DEF_SULMW;  Q67PR5, DEF_SYMTH;  Q8DIB4, DEF_SYNEL;  
A0LEJ7, DEF_SYNFM;  Q7U9D4, DEF_SYNPX;  A5GQU9, DEF_SYNR3;  
Q0I7A5, DEF_SYNS3;  Q3AZU8, DEF_SYNS9;  Q3AHC4, DEF_SYNSC;  
Q0AXL3, DEF_SYNWW;  P73441, DEF_SYNY3;  A8F524, DEF_THELT;  
P96113, DEF_THEMA;  A5ILS1, DEF_THEP1;  Q72H33, DEF_THET2;  
Q5SLH2, DEF_THET8;  P43522, DEF_THETH;  Q8R9T0, DEF_THETN;  
Q31J84, DEF_THICR;  O83738, DEF_TREPA;  Q83HQ3, DEF_TROW8;  
Q83GH8, DEF_TROWT;  B1AJA6, DEF_UREP2;  Q9PQ25, DEF_UREPA;  
Q5E1Q8, DEF_VIBF1;  A7N121, DEF_VIBHB;  Q8D258, DEF_WIGBR;  
Q73IJ6, DEF_WOLPM;  Q7M7M2, DEF_WOLSU;  Q5GTG9, DEF_WOLTR;  
P63917, DEF_XYLFA;  P63918, DEF_XYLFT;  A1JRZ1, DEF_YERE8;  
A7FNK2, DEF_YERP3;  Q1C2X9, DEF_YERPA;  Q8ZJ79, DEF_YERPE;  
Q1CCX6, DEF_YERPN;  A4TH23, DEF_YERPP;  Q664V4, DEF_YERPS;  
Q9REQ2, DEF_ZYMMO;  

View entry in original ENZYME format
View entry in raw text format (no links)

All UniProtKB/Swiss-Prot entries referenced in this entry, with possibility to download in different formats, align etc.
All ENZYME / UniProtKB/Swiss-Prot entries corresponding to 3.5.1.-
All ENZYME / UniProtKB/Swiss-Prot entries corresponding to 3.5.-.-
All ENZYME / UniProtKB/Swiss-Prot entries corresponding to 3.-.-.-

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot ENZYME